Welcome to the Best Western Yacht Harbor Hotel! Our San Diego waterfront hotel offers guests an unbeatable location, modern refurbished guest rooms, and the care you would expect from a professional family-owned business. Our newly refurbished guest rooms offer free internet, modern décor, balconies, mini-refrigerators and microwaves, flat-screen TVs, thermostat heating and cooling, and comfy beds. Relax in our heated pool and Jacuzzi®, work out in our fitness center, and check flights and print your boarding pass in our business center. After enjoying our complimentary hot breakfast, explore SeaWorld®, the San Diego Zoo®, the USS Midway Museum, or check out the waves at the nearby Ocean Beach. Enjoy the variety of quality, reasonably priced restaurants within easy walking distance. Take a stroll along the harbor promenade across the street and watch the sports fishing charter boats arrive with their catch. Explore Old Town and visit the Gaslamp District for a night of fun. Whatever you want your visit to be, it can happen here.

Property Information

Year Built: 1977
Floors: 6
Nonsmoking rooms: 90
Total rooms: 105


Resort Details


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General Policies & Fine Print

Check In: 3:00 PM
Check Out: 12:00 PM
General Policies: Children 12 And Under Are Free In Room With One Paying Adult In Existing Bedding.
Kids Stay Free Policy Maximum number of children per paid adult: 0Maximum child age: 12
Pet Policy Pets Not Allowed

Customer Ratings & Reviews

TripAdvisor Traveler Rating

4.0 1852 reviews
  • 5.0 star tripadvisor rating
    Great value

    Shelter Island is nice but this is almost as convenient, the staff is pleasant and helpful. The room was spacious (has a small microwave and fridge) and clean. Parking was easy and the courtesy breakfast was probably the best I ever had.

    May 20, 2024
  • 5.0 star tripadvisor rating
    Another wonderful stay!

    Best Western, nationwide, is the best value for travel, we've always had wonderful service and a great stay!

    May 10, 2024
  • 5.0 star tripadvisor rating
    Best western

    The Best Western Yacht Harbor Hotel was a great find! The staff was pleasant, rooms were clean, breakfast was tasty. Highly recommended.

    May 10, 2024
  • 5.0 star tripadvisor rating
    The spot

    This spot is pretty much close to downtown, airport and harbor. Around this place is food, beer and grocery.

    May 07, 2024
  • 4.0 star tripadvisor rating
    Nice Stay

    Another quick and easy stay at this hotel. Front Desk Associate welcomed me with a smile and was efficient and professional. Acknowledged my status and got me on my way very quickly. Room on the third floor was large and comfortable. Appreciate the fluffy pillows! Like that the single-serve coffeemaker is available for a pick-me-up right away, I always take advantage of that. Didn't get the name of the FDA that was at the desk when I dropped off my key -- I was out the door in a hurry -- but he thanked me for staying there, which I appreciated. My room was at the front, so you do get a bit of street noise, but that drops off as the evening wears on (as does the airplane sounds from SAN). And those rooms overlook the pool, so be advised you might get some noise from that, but that drops off, too. Breakfast Area is fairly large, which is a plus. The usual items, some kind of egg/pork dish, potato patties, you know the drill. Don't think there's a pancake maker, at least I don't recall seeing one. Lots of condiments and tortillas -- make a breakfast burrito! The Best Western Yacht Harbor Hotel fits the bill for a nice place to stay in San Diego. It's my go-to place, and I'll be sure to return the next time I'm in town.

    May 03, 2024
Prices per person based on double occupancy including round-trip airfare via U.S. certified air carriers and round-trip airport/hotel transfers when arriving at airport closest to destination (for exceptions see Frequently Asked Questions), hotel taxes and baggage handling, fuel surcharges, and all pre-collected U.S. and foreign taxes. In some instances, pricing may specifically apply to one of multiple flights on select departure days. All packages are based on the lowest hotel/air classes available at time of publication, capacity controlled, subject to availability and change without notice. Promotional pricing may only be available for a limited time. Fees may apply for carry-on and checked baggage-view Baggage Policies. Some resort fees, environmental levies and departure taxes are not included and may be payable in resort. View Frequently Asked Questions for more information. Apple Vacations is not responsible for errors or omissions. Cancellation policies apply. Bookings are subject to the Fair Trade Contract. All public charter flights are operated by ALG Vacations Corp: Allegiant Air: PC 18-231, A319-156 seats or A320-186 seats /PC 18-234, A319-156 seats or A320-186 seats; Miami Air operated by TUI Airlines Belgium N.V. : PC 19-085 & PC 19-117, B737-800, 180 seats/PC 19-091, B737-800-183 seats; Swift Air: PC 19-092, B737-400-150 seats; Viva Aerobus: PC 18-228, A320-180 seats/ PC 19-079, A320-180-185 seats/PC 19-094, A320-185 seats. CST2139014-20 120319